BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB017A01LP1|AL427093
(507 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1721 927 0.0
>3x_Contig1721
Length = 17834
Score = 927 bits (467), Expect = 0.0
Identities = 495/501 (98%), Gaps = 3/501 (0%)
Strand = Plus / Plus
Query: 10 tggataacccaaagaaaaa-ttccaatggtgctgcgtc-ac-agcatgccacagaagtgt 66
||||||||||||||||||| |||||||||||||||||| || ||||||||||||||||||
Sbjct: 1051 tggataacccaaagaaaaaattccaatggtgctgcgtctactagcatgccacagaagtgt 1110
Query: 67 acaagggagaaaggaaattgaagcccattgtcgatttcgctttatctagagttaaaaact 126
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1111 acaagggagaaaggaaattgaagcccattgtcgatttcgctttatctagagtgaaaaact 1170
Query: 127 acgtgaagcggttgaaccgttacagtaagttcgaagaactattaaaatcttcaagaacca 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1171 acgtgaagcggttgaaccgttacagtaagttcgaagaactattaaaatcttcaagaacca 1230
Query: 187 ggtacgctgtagtgcttatctcaaagaaggagaagattccaactttatataaatctgtag 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1231 ggtacgctgtagtgcttatctcaaagaaggagaagattccaactttatataaatctgtag 1290
Query: 247 ccctcgattggcttgggatctacgatttctattcgatctgggacgagaaattgcaaggcg 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1291 ccctcgattggcttgggatctacgatttctattcgatctgggacgagaaattgcaaggcg 1350
Query: 307 tgtcacaattgagttttgagaacgatacaaagaattggccaaatactgttaaatacctcc 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1351 tgtcacaattgagttttgagaacgatacaaagaattggccaaatactgttaaatacctcc 1410
Query: 367 aatcgttagaaaaaagttaaactgaattacaatcgcccagaatcgtagtgatagatagag 426
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1411 aatcgttagaaaaaagtgaaactgaattacaatcgcccagaatcgtagtgatagatagag 1470
Query: 427 aaacagatacttatgacgaactagacatattaaaaactacagataaaaatkacattgcaa 486
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1471 aaacagatacttatgacgaactagacatattaaaaactacagataaaaatgacattgcaa 1530
Query: 487 cgttcctttcgaaattcgagt 507
|||||||||||||||||||||
Sbjct: 1531 cgttcctttcgaaattcgagt 1551
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3921
Number of Sequences: 1807
Number of extensions: 3921
Number of successful extensions: 85
Number of sequences better than 1.0e-20: 1
length of query: 507
length of database: 10,358,551
effective HSP length: 16
effective length of query: 491
effective length of database: 10,329,639
effective search space: 5071852749
effective search space used: 5071852749
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)